| Subject | QS | THE | ARWU | U.S. News |
|---|---|---|---|---|
| Philosophy | #101-150 | — | — | — |
| Environmental Science | #401-450 | — | #101-150 | — |
| Dentistry | — | — | #101-150 | — |
| Biological Sciences | #251-300 | — | #151-200 | — |
| Psychology | #251-300 | — | #151-200 | — |
| Medicine / Clinical | #401-450 | — | #151-200 | — |
| Physics & Astronomy | #251-300 | — | #201-300 | — |
| Chemistry | #351-400 | — | #201-300 | — |
| Mathematics | #501-600 | — | #201-300 | — |
| Biotechnology | — | — | #201-300 | — |
| Veterinary Science | — | — | #201-300 | — |
| Linguistics | #301-350 | — | — | — |
| Sociology | #301-375 | — | — | — |
| Nanoscience & Nanotechnology | — | — | #301-400 | — |
| Pharmacy & Pharmacology | — | — | #301-400 | — |
| Economics & Econometrics | — | — | #301-400 | — |
| Natural / Physical Sciences | #313 | — | — | — |
| Life Sciences & Medicine | #369 | — | — | — |
| Materials Science | #401-550 | — | #401-500 | — |
| Earth & Geosciences | — | — | #401-500 | — |
| Public Health | — | — | #401-500 | — |
| Arts & Humanities | #501-550 | — | — | — |
University of Jena ranks #575 in QS 2026, #401-500 in ARWU 2025 and #394 in U.S. News 2026. Its consensus position across the major rankings is #509 globally.